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16:89986091 G / A


Filter Status
PASS
dbSNP
rs11547464
Allele Frequency
0.005003
Filtering AF
0.006769 (European (Non-Finnish))
Allele Count
601 / 120116
UCSC
16-89986091-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 21 transcripts in 6 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 483 66092 1 0.007308
East Asian 1 8568 0 0.0001167
Other 5 894 0 0.005593
African 11 9948 0 0.001106
Latino 91 11530 1 0.007892
South Asian 2 16476 0 0.0001214
European (Finnish) 8 6608 0 0.001211
Total 601 120116 2 0.005003

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.