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17:12896274 C / T


Filter Status
PASS
dbSNP
rs119484086
Allele Frequency
0.0005145
Filtering AF
0.000601 (European (Non-Finnish))
Allele Count
62 / 120500
UCSC
17-12896274-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 51 66264 0 0.0007696
East Asian 0 8532 0 0
Other 0 906 0 0
African 4 10204 0 0.000392
Latino 3 11530 0 0.0002602
South Asian 2 16470 0 0.0001214
European (Finnish) 2 6594 0 0.0003033
Total 62 120500 0 0.0005145

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.