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17:18051447 C / T


Filter Status
PASS
dbSNP
rs121908970
Allele Frequency
0.004208
Filtering AF
0.004485 (European (Non-Finnish))
Allele Count
504 / 119760
UCSC
17-18051447-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 3 transcripts in 2 genes:

missense
non coding transcript exon
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 325 65974 2 0.004926
East Asian 0 8588 0 0
Other 4 888 0 0.004505
African 3 9654 0 0.0003108
Latino 10 11550 0 0.0008658
South Asian 21 16502 0 0.001273
European (Finnish) 141 6604 3 0.02135
Total 504 119760 5 0.004208

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.