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17:26092631 A / G


Filter Status
PASS
dbSNP
rs1060822
Allele Frequency
0.6637
Filtering AF
0.8224 (South Asian)
Allele Count
78887 / 118866
UCSC
17-26092631-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 1 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 39697 64910 12218 0.6116
East Asian 6028 8600 2119 0.7009
Other 615 898 217 0.6849
African 7709 9838 3015 0.7836
Latino 7088 11538 2175 0.6143
South Asian 13750 16486 5771 0.834
European (Finnish) 4000 6596 1192 0.6064
Total 78887 118866 26707 0.6637

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.