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17:41245136 C / G


Filter Status
PASS
dbSNP
rs55746541
Allele Frequency
5.769e-05
Filtering AF
3.4e-05 (African)
Allele Count
7 / 121340
UCSC
17-41245136-C-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 4 66710 0 5.996e-05
East Asian 0 8652 0 0
Other 0 908 0 0
African 2 10392 0 0.0001925
Latino 0 11578 0 0
South Asian 1 16486 0 6.066e-05
European (Finnish) 0 6614 0 0
Total 7 121340 0 5.769e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.