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17:48245078 G / A


Filter Status
PASS
dbSNP
rs137852621
Allele Frequency
9.173e-06
Filtering AF
0 (None)
Allele Count
1 / 109018
UCSC
17-48245078-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 1 59742 0 1.674e-05
East Asian 0 7708 0 0
Other 0 826 0 0
African 0 9186 0 0
Latino 0 10212 0 0
South Asian 0 15466 0 0
European (Finnish) 0 5878 0 0
Total 1 109018 0 9.173e-06

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.