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17:56584205 A / C


Filter Status
PASS
dbSNP
rs2302189
Allele Frequency
0.418
Filtering AF
0.645 (Latino)
Allele Count
48984 / 117174
UCSC
17-56584205-A-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 9 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 24813 64476 4577 0.3848
East Asian 4508 8370 1182 0.5386
Other 341 856 68 0.3984
African 2810 9894 384 0.284
Latino 7363 11198 2446 0.6575
South Asian 6896 16096 1498 0.4284
European (Finnish) 2253 6284 354 0.3585
Total 48984 117174 10509 0.418

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.