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17:59924612 G / C


Filter Status
PASS
dbSNP
rs4988344
Allele Frequency
0.1899
Filtering AF
0.5415 (East Asian)
Allele Count
23026 / 121226
UCSC
17-59924612-G-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 2 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 10860 66682 891 0.1629
East Asian 4790 8636 1315 0.5547
Other 161 904 18 0.1781
African 752 10314 30 0.07291
Latino 2203 11572 229 0.1904
South Asian 2548 16510 223 0.1543
European (Finnish) 1712 6608 201 0.2591
Total 23026 121226 2907 0.1899

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.