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17:73836181 G / A


Filter Status
PASS
dbSNP
rs202020396
Allele Frequency
7.89e-05
Filtering AF
5e-05 (South Asian)
Allele Count
9 / 114062
UCSC
17-73836181-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 3 62852 0 4.773e-05
East Asian 0 8320 0 0
Other 1 828 0 0.001208
African 1 9476 0 0.0001055
Latino 1 10890 0 9.183e-05
South Asian 3 16088 0 0.0001865
European (Finnish) 0 5608 0 0
Total 9 114062 0 7.89e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.