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17:78079597 A / G


Filter Status
PASS
dbSNP
rs1042393
Allele Frequency
0.6746
Filtering AF
0.74 (European (Non-Finnish))
Allele Count
81474 / 120782
UCSC
17-78079597-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 49403 66266 18465 0.7455
East Asian 4555 8606 1196 0.5293
Other 647 902 227 0.7173
African 5595 10338 1486 0.5412
Latino 5308 11562 1293 0.4591
South Asian 10927 16510 3628 0.6618
European (Finnish) 5039 6598 1904 0.7637
Total 81474 120782 28199 0.6746

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.