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17:78185927 A / G


Filter Status
PASS
dbSNP
rs138504221
Allele Frequency
9.174e-05
Filtering AF
9.3e-05 (European (Non-Finnish))
Allele Count
11 / 119904
UCSC
17-78185927-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 11 65678 0 0.0001675
East Asian 0 8634 0 0
Other 0 886 0 0
African 0 10236 0 0
Latino 0 11504 0 0
South Asian 0 16466 0 0
European (Finnish) 0 6500 0 0
Total 11 119904 0 9.174e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.