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17:78185942 G / A


Filter Status
PASS
dbSNP
rs143947056
Allele Frequency
3.339e-05
Filtering AF
2e-05 (European (Non-Finnish))
Allele Count
4 / 119784
UCSC
17-78185942-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 4 65626 0 6.095e-05
East Asian 0 8630 0 0
Other 0 886 0 0
African 0 10214 0 0
Latino 0 11484 0 0
South Asian 0 16462 0 0
European (Finnish) 0 6482 0 0
Total 4 119784 0 3.339e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.