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17:79596811 C / T

Note: This variant is found in phase with 17-79596813-G-C in 1 individuals.

Filter Status
PASS
dbSNP
rs9894429
Allele Frequency
0.555
Filtering AF
0.755 (East Asian)
Allele Count
67022 / 120754
UCSC
17-79596811-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 5 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 30403 66736 6966 0.4556
East Asian 6640 8618 2559 0.7705
Other 469 898 133 0.5223
African 7414 9804 2819 0.7562
Latino 8759 11576 3387 0.7567
South Asian 10459 16508 3400 0.6336
European (Finnish) 2878 6614 633 0.4351
Total 67022 120754 19897 0.555

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.