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18:21124945 C / G


Filter Status
PASS
dbSNP
rs1788799
Allele Frequency
0.7177
Filtering AF
0.915 (East Asian)
Allele Count
87006 / 121226
UCSC
18-21124945-C-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 5 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 42490 66608 13600 0.6379
East Asian 8064 8652 3757 0.932
Other 645 906 226 0.7119
African 9565 10398 4398 0.9199
Latino 9449 11552 3882 0.818
South Asian 12460 16502 4715 0.7551
European (Finnish) 4333 6608 1429 0.6557
Total 87006 121226 32007 0.7177

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.