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18:29178618 G / A


Filter Status
PASS
dbSNP
rs76992529
Allele Frequency
0.001376
Filtering AF
0.0129 (African)
Allele Count
167 / 121360
UCSC
18-29178618-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 2 transcripts in 1 genes:

missense
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 3 66720 0 4.496e-05
East Asian 0 8642 0 0
Other 0 904 0 0
African 154 10404 1 0.0148
Latino 8 11568 0 0.0006916
South Asian 2 16510 0 0.0001211
European (Finnish) 0 6612 0 0
Total 167 121360 1 0.001376

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.