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18:33694120 G / A


Filter Status
PASS
dbSNP
rs1050631
Allele Frequency
0.3225
Filtering AF
0.3968 (Latino)
Allele Count
38852 / 120460
UCSC
18-33694120-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 23708 66604 4257 0.356
East Asian 1574 8620 144 0.1826
Other 261 896 45 0.2913
African 1968 9802 204 0.2008
Latino 4702 11566 954 0.4065
South Asian 4590 16360 669 0.2806
European (Finnish) 2049 6612 321 0.3099
Total 38852 120460 6594 0.3225

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.