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18:60985879 T / C


Filter Status
PASS
dbSNP
rs1801018
Allele Frequency
0.3688
Filtering AF
0.4251 (European (Non-Finnish))
Allele Count
44176 / 119776
UCSC
18-60985879-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 5 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 28307 65942 6093 0.4293
East Asian 853 8594 41 0.09926
Other 367 894 78 0.4105
African 764 9670 40 0.07901
Latino 4777 11558 1013 0.4133
South Asian 6028 16504 1140 0.3652
European (Finnish) 3080 6614 745 0.4657
Total 44176 119776 9150 0.3688

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.