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19:10679240 C / G


Warning! This variant is only covered in 30216 individuals (adjusted allele number = 60432).
This means that the site is covered in fewer than 80% of the individuals in ExAC, which may indicate a low-quality site.


Filter Status
PASS
dbSNP
rs1968445
Allele Frequency
0.9601
Filtering AF
0.9741 (East Asian)
Allele Count
58020 / 60432
UCSC
19-10679240-C-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 16 transcripts in 3 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 31485 33058 14970 0.9524
East Asian 4935 4948 2461 0.9974
Other 371 390 176 0.9513
African 4102 4132 2036 0.9927
Latino 5430 5560 2651 0.9766
South Asian 10227 10798 4847 0.9471
European (Finnish) 1470 1546 699 0.9508
Total 58020 60432 27840 0.9601

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.