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19:15302844 T / C

Note: This variant is found in phase with 19-15302845-G-A in 2 individuals.

Filter Status
PASS
dbSNP
rs1043994
Allele Frequency
0.8581
Filtering AF
0.8965 (African)
Allele Count
103251 / 120322
UCSC
19-15302844-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 2 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 58008 65900 25552 0.8802
East Asian 7480 8624 3238 0.8673
Other 763 900 328 0.8478
African 9391 10298 4278 0.9119
Latino 7966 11520 2748 0.6915
South Asian 13907 16504 5888 0.8426
European (Finnish) 5736 6576 2500 0.8723
Total 103251 120322 44532 0.8581

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.