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19:18186618 T / C


Filter Status
PASS
dbSNP
rs11575934
Allele Frequency
0.2771
Filtering AF
0.3441 (East Asian)
Allele Count
33544 / 121040
UCSC
19-18186618-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 3 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 21475 66508 3459 0.3229
East Asian 3058 8624 527 0.3546
Other 240 904 27 0.2655
African 1274 10342 64 0.1232
Latino 1720 11564 151 0.1487
South Asian 3660 16510 418 0.2217
European (Finnish) 2117 6588 346 0.3213
Total 33544 121040 4992 0.2771

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.