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19:38990601 T / A


Filter Status
PASS
dbSNP
rs118192174
Allele Frequency
4.126e-05
Filtering AF
0.000119 (South Asian)
Allele Count
5 / 121190
UCSC
19-38990601-T-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 0 66582 0 0
East Asian 0 8646 0 0
Other 0 904 0 0
African 0 10380 0 0
Latino 0 11568 0 0
South Asian 5 16508 0 0.0003029
European (Finnish) 0 6602 0 0
Total 5 121190 0 4.126e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.