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19:38994959 C / T


Filter Status
PASS
dbSNP
rs193922826
Allele Frequency
8.253e-06
Filtering AF
0 (None)
Allele Count
1 / 121162
UCSC
19-38994959-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 1 66588 0 1.502e-05
East Asian 0 8650 0 0
Other 0 902 0 0
African 0 10386 0 0
Latino 0 11554 0 0
South Asian 0 16488 0 0
European (Finnish) 0 6594 0 0
Total 1 121162 0 8.253e-06

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.