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19:39002961 G / A


Filter Status
PASS
dbSNP
rs193922832
Allele Frequency
1.649e-05
Filtering AF
0 (None)
Allele Count
2 / 121282
UCSC
19-39002961-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 1 66662 0 1.5e-05
East Asian 0 8648 0 0
Other 0 906 0 0
African 0 10368 0 0
Latino 0 11574 0 0
South Asian 1 16510 0 6.057e-05
European (Finnish) 0 6614 0 0
Total 2 121282 0 1.649e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.