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19:40877595 G / A


Filter Status
PASS
dbSNP
rs145999145
Allele Frequency
0.003077
Filtering AF
0.004102 (European (Non-Finnish))
Allele Count
355 / 115366
UCSC
19-40877595-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 288 63532 1 0.004533
East Asian 2 8416 0 0.0002376
Other 1 846 0 0.001182
African 13 9714 0 0.001338
Latino 18 11016 0 0.001634
South Asian 18 15666 0 0.001149
European (Finnish) 15 6176 0 0.002429
Total 355 115366 1 0.003077

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.