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19:41352941 A / G


Filter Status
PASS
dbSNP
rs111033610
Allele Frequency
0.001046
Filtering AF
0.01119 (East Asian)
Allele Count
122 / 116674
UCSC
19-41352941-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 5 transcripts in 2 genes:

missense 3' UTR
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 1 65122 0 1.536e-05
East Asian 107 8090 6 0.01323
Other 0 866 0 0
African 0 9904 0 0
Latino 1 11236 0 8.9e-05
South Asian 13 14928 0 0.0008708
European (Finnish) 0 6528 0 0
Total 122 116674 6 0.001046

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.