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19:45411064 G / A


Filter Status
PASS
dbSNP
rs201672011
Allele Frequency
0.000159
Filtering AF
7.4e-05 (Latino)
Allele Count
18 / 113212
UCSC
19-45411064-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 7 62446 0 0.0001121
East Asian 0 8354 0 0
Other 0 828 0 0
African 2 9360 0 0.0002137
Latino 3 10972 0 0.0002734
South Asian 2 15820 0 0.0001264
European (Finnish) 4 5432 0 0.0007364
Total 18 113212 0 0.000159

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.