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19:47278938 G / A

Note: This variant is multiallelic! The other alt alleles are:

Filter Status
PASS
dbSNP
rs1060043
Allele Frequency
0.09609
Filtering AF
0.1108 (European (Non-Finnish))
Allele Count
11663 / 121380
UCSC
19-47278938-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 6 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 7538 66726 446 0.113
East Asian 148 8644 1 0.01712
Other 99 904 6 0.1095
African 301 10404 6 0.02893
Latino 540 11578 11 0.04664
South Asian 1820 16510 138 0.1102
European (Finnish) 1217 6614 112 0.184
Total 11663 121380 720 0.09609

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.