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19:49206631 A / T


Filter Status
PASS
dbSNP
rs1047781
Allele Frequency
0.03513
Filtering AF
0.456 (East Asian)
Allele Count
4210 / 119848
UCSC
19-49206631-A-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 3 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 13 65646 0 0.000198
East Asian 4021 8590 942 0.4681
Other 14 890 1 0.01573
African 13 10166 0 0.001279
Latino 12 11554 0 0.001039
South Asian 137 16388 8 0.00836
European (Finnish) 0 6614 0 0
Total 4210 119848 951 0.03513

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.