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19:50747534 G / T


Filter Status
PASS
dbSNP
rs119103280
Allele Frequency
0.002858
Filtering AF
0.003743 (European (Non-Finnish))
Allele Count
343 / 119994
UCSC
19-50747534-G-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 275 66322 0 0.004146
East Asian 0 8586 0 0
Other 7 890 0 0.007865
African 9 9612 0 0.0009363
Latino 24 11514 0 0.002084
South Asian 28 16466 0 0.0017
European (Finnish) 0 6604 0 0
Total 343 119994 0 0.002858

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.