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19:51361757 T / C


Filter Status
PASS
dbSNP
rs17632542
Allele Frequency
0.05525
Filtering AF
0.07319 (European (Non-Finnish))
Allele Count
6701 / 121290
UCSC
19-51361757-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 4996 66678 178 0.07493
East Asian 3 8648 0 0.0003469
Other 54 906 3 0.0596
African 116 10376 1 0.01118
Latino 317 11568 8 0.0274
South Asian 840 16502 30 0.0509
European (Finnish) 375 6612 8 0.05672
Total 6701 121290 228 0.05525

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.