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19:580428 G / A


Filter Status
PASS
dbSNP
rs104894669
Allele Frequency
8.394e-05
Filtering AF
0.000466 (East Asian)
Allele Count
10 / 119138
UCSC
19-580428-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 1 65066 0 1.537e-05
East Asian 8 8538 0 0.000937
Other 0 882 0 0
African 0 10138 0 0
Latino 1 11494 0 8.7e-05
South Asian 0 16464 0 0
European (Finnish) 0 6556 0 0
Total 10 119138 0 8.394e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.