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19:6686089 G / A


Filter Status
PASS
dbSNP
rs11569536
Allele Frequency
0.05207
Filtering AF
0.06369 (European (Non-Finnish))
Allele Count
6321 / 121402
UCSC
19-6686089-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 7 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 4358 66734 131 0.0653
East Asian 94 8650 2 0.01087
Other 32 908 0 0.03524
African 688 10406 25 0.06612
Latino 248 11578 0 0.02142
South Asian 522 16512 10 0.03161
European (Finnish) 379 6614 10 0.0573
Total 6321 121402 178 0.05207

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.