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19:6690613 T / G


Filter Status
PASS
dbSNP
rs3745568
Allele Frequency
0.09318
Filtering AF
0.1126 (European (Non-Finnish))
Allele Count
11304 / 121310
UCSC
19-6690613-T-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 7653 66698 434 0.1147
East Asian 706 8640 29 0.08171
Other 79 904 5 0.08739
African 194 10400 1 0.01865
Latino 545 11558 14 0.04715
South Asian 1403 16506 64 0.085
European (Finnish) 724 6604 37 0.1096
Total 11304 121310 584 0.09318

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.