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19:6709704 C / T


Filter Status
PASS
dbSNP
rs2230205
Allele Frequency
0.1744
Filtering AF
0.42 (East Asian)
Allele Count
21141 / 121240
UCSC
19-6709704-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 5 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 9505 66608 722 0.1427
East Asian 3727 8636 772 0.4316
Other 164 906 17 0.181
African 1251 10386 59 0.1205
Latino 1306 11578 84 0.1128
South Asian 3898 16512 508 0.2361
European (Finnish) 1290 6614 137 0.195
Total 21141 121240 2299 0.1744

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.