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19:6713291 C / T


Filter Status
PASS
dbSNP
rs2230201
Allele Frequency
0.1953
Filtering AF
0.4319 (East Asian)
Allele Count
23554 / 120578
UCSC
19-6713291-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 7 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 11259 66216 1019 0.17
East Asian 3807 8580 820 0.4437
Other 180 898 22 0.2004
African 1268 10296 57 0.1232
Latino 1649 11504 117 0.1433
South Asian 3930 16490 508 0.2383
European (Finnish) 1461 6594 166 0.2216
Total 23554 120578 2709 0.1953

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.