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2:103149100 G / A


Filter Status
PASS
dbSNP
rs1014286
Allele Frequency
0.6287
Filtering AF
0.7313 (Latino)
Allele Count
75892 / 120712
UCSC
2-103149100-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 1 transcripts in 1 genes:

missense
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 41852 66312 13178 0.6311
East Asian 4291 8576 1057 0.5003
Other 565 902 174 0.6264
African 6597 10384 2106 0.6353
Latino 8532 11460 3176 0.7445
South Asian 9288 16494 2640 0.5631
European (Finnish) 4767 6584 1739 0.724
Total 75892 120712 24070 0.6287

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.