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2:113590390 G / A


Filter Status
PASS
dbSNP
rs1143634
Allele Frequency
0.1964
Filtering AF
0.2436 (European (Non-Finnish))
Allele Count
23848 / 121404
UCSC
2-113590390-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 8 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 16466 66732 2024 0.2467
East Asian 192 8654 2 0.02219
Other 225 908 28 0.2478
African 1360 10406 78 0.1307
Latino 1243 11578 70 0.1074
South Asian 2689 16512 236 0.1629
European (Finnish) 1673 6614 210 0.2529
Total 23848 121404 2648 0.1964

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.