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2:11727507 G / A


Filter Status
PASS
dbSNP
rs13394619
Allele Frequency
0.5337
Filtering AF
0.8417 (African)
Allele Count
64768 / 121364
UCSC
2-11727507-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 6 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 33134 66722 8284 0.4966
East Asian 4509 8640 1193 0.5219
Other 491 908 144 0.5407
African 8908 10400 3810 0.8565
Latino 6526 11574 1829 0.5639
South Asian 7941 16506 1940 0.4811
European (Finnish) 3259 6614 803 0.4927
Total 64768 121364 18003 0.5337

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.