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2:1488386 T / G


Filter Status
PASS
dbSNP
rs121908083
Allele Frequency
9.924e-05
Filtering AF
0.000104 (European (Non-Finnish))
Allele Count
12 / 120918
UCSC
2-1488386-T-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 12 66386 0 0.0001808
East Asian 0 8618 0 0
Other 0 900 0 0
African 0 10352 0 0
Latino 0 11550 0 0
South Asian 0 16502 0 0
European (Finnish) 0 6610 0 0
Total 12 120918 0 9.924e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.