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2:158630626 C / G


Filter Status
VQSRTrancheSNP99.95to100.00
dbSNP
rs121912678
Allele Frequency
0.0002034
Filtering AF
9.5e-05 (European (Non-Finnish))
Allele Count
24 / 118002
UCSC
2-158630626-C-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 11 64776 0 0.0001698
East Asian 2 8488 0 0.0002356
Other 1 858 0 0.001166
African 2 9928 0 0.0002015
Latino 0 11460 0 0
South Asian 0 16488 0 0
European (Finnish) 8 6004 0 0.001332
Total 24 118002 0 0.0002034

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.