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2:202149589 G / C


Filter Status
PASS
dbSNP
rs1045485
Allele Frequency
0.09069
Filtering AF
0.122 (European (Non-Finnish))
Allele Count
11008 / 121386
UCSC
2-202149589-G-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 8288 66722 526 0.1242
East Asian 3 8654 0 0.0003467
Other 90 908 6 0.09912
African 662 10404 28 0.06363
Latino 584 11572 21 0.05047
South Asian 708 16512 28 0.04288
European (Finnish) 673 6614 34 0.1018
Total 11008 121386 643 0.09069

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.