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2:219525942 A / G


Filter Status
PASS
dbSNP
rs28937590
Allele Frequency
0.0003871
Filtering AF
0.000198 (European (Non-Finnish))
Allele Count
47 / 121410
UCSC
2-219525942-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 20 66738 0 0.0002997
East Asian 0 8654 0 0
Other 1 908 0 0.001101
African 0 10406 0 0
Latino 0 11578 0 0
South Asian 0 16512 0 0
European (Finnish) 26 6614 0 0.003931
Total 47 121410 0 0.0003871

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.