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2:234590970 T / G

Warning! This variant is found in phase with 2-234590968-A-G in 1 individuals, altering its functional interpretation
.
Warning! This variant is found in phase with 2-234590969-A-G in 846 individuals, altering its functional interpretation
.

Filter Status
PASS
dbSNP
rs17868323
Allele Frequency
0.588
Filtering AF
0.6428 (South Asian)
Allele Count
70455 / 119812
UCSC
2-234590970-T-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 7 transcripts in 4 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 40576 65812 12198 0.6165
East Asian 3518 8550 676 0.4115
Other 536 902 159 0.5942
African 6105 10084 1825 0.6054
Latino 4509 11480 771 0.3928
South Asian 10750 16460 3516 0.6531
European (Finnish) 4461 6524 1517 0.6838
Total 70455 119812 20662 0.588

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.