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2:38298203 C / G


Filter Status
PASS
dbSNP
rs1056836
Allele Frequency
0.6195
Filtering AF
0.8803 (East Asian)
Allele Count
75125 / 121274
UCSC
2-38298203-C-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 11 transcripts in 4 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 37821 66646 10795 0.5675
East Asian 7759 8650 3485 0.897
Other 584 908 195 0.6432
African 2374 10396 297 0.2284
Latino 9308 11562 3761 0.8051
South Asian 13082 16508 5219 0.7925
European (Finnish) 4197 6604 1314 0.6355
Total 75125 121274 25066 0.6195

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.