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2:47703500 T / C


Filter Status
PASS
dbSNP
rs2303428
Allele Frequency
0.1155
Filtering AF
0.3395 (East Asian)
Allele Count
13796 / 119492
UCSC
2-47703500-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 6727 65734 345 0.1023
East Asian 3002 8578 536 0.35
Other 81 898 3 0.0902
African 239 10146 5 0.02356
Latino 812 11328 32 0.07168
South Asian 2248 16278 169 0.1381
European (Finnish) 687 6530 31 0.1052
Total 13796 119492 1121 0.1155

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.