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2:48921375 T / C

Note: This variant is found in phase with 2-48921374-A-G in 12 individuals.

Filter Status
PASS
dbSNP
rs2293275
Allele Frequency
0.6376
Filtering AF
0.9128 (East Asian)
Allele Count
62454 / 97948
UCSC
2-48921375-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 32670 51886 9485 0.6296
East Asian 7101 7628 3302 0.9309
Other 491 772 148 0.636
African 2804 8530 409 0.3287
Latino 7021 9360 2547 0.7501
South Asian 8850 13958 2714 0.634
European (Finnish) 3517 5814 989 0.6049
Total 62454 97948 19594 0.6376

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.