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2:50850686 G / A


Filter Status
PASS
dbSNP
rs2303298
Allele Frequency
0.02268
Filtering AF
0.09549 (East Asian)
Allele Count
2733 / 120484
UCSC
2-50850686-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 8 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 253 66656 1 0.003796
East Asian 867 8578 44 0.1011
Other 19 894 2 0.02125
African 358 9798 7 0.03654
Latino 1014 11440 39 0.08864
South Asian 172 16508 3 0.01042
European (Finnish) 50 6610 0 0.007564
Total 2733 120484 96 0.02268

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.