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2:99012480 C / T


Filter Status
PASS
dbSNP
rs104893613
Allele Frequency
0.0001402
Filtering AF
0.000126 (European (Non-Finnish))
Allele Count
17 / 121232
UCSC
2-99012480-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 14 66656 0 0.00021
East Asian 0 8590 0 0
Other 0 906 0 0
African 1 10396 0 9.619e-05
Latino 0 11562 0 0
South Asian 2 16508 0 0.0001212
European (Finnish) 0 6614 0 0
Total 17 121232 0 0.0001402

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.