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2:99012481 G / A


Filter Status
PASS
dbSNP
rs104893614
Allele Frequency
6.598e-05
Filtering AF
3.4e-05 (African)
Allele Count
8 / 121250
UCSC
2-99012481-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 4 66662 0 6e-05
East Asian 0 8598 0 0
Other 0 906 0 0
African 2 10400 0 0.0001923
Latino 0 11560 0 0
South Asian 2 16510 1 0.0001211
European (Finnish) 0 6614 0 0
Total 8 121250 1 6.598e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.