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20:10633237 G / A


Filter Status
PASS
dbSNP
rs1131695
Allele Frequency
0.4541
Filtering AF
0.522 (South Asian)
Allele Count
54914 / 120936
UCSC
20-10633237-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 2 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 31168 66474 7312 0.4689
East Asian 2847 8600 496 0.331
Other 427 900 104 0.4744
African 3617 10362 620 0.3491
Latino 5125 11520 1122 0.4449
South Asian 8767 16502 2337 0.5313
European (Finnish) 2963 6578 661 0.4504
Total 54914 120936 12652 0.4541

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.